BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C11SP1|AL426345
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1125 1423 0.0
>3x_Contig1125
Length = 5749
Score = 1423 bits (700), Expect = 0.0
Identities = 749/784 (95%)
Strand = Plus / Plus
Query: 1 aaaaagttgttagcatcttcggaggatgtgcgaccacatggttagtgttggttacgtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 aaaaagttgttagcatcttcggaggatgtgcgaccacatggttagtgttggttacgtgag 2463
Query: 61 ccccgattatyttctcttagcaaagagaagaacgctctctaatgtatatmtgcmtctatg 120
| |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 2464 caccgattattttctcttagcaaagagaagaacgctctctaatgtatatatgcatctatg 2523
Query: 121 tmacamaatgttaagaagtacctttcccatattcatgttgaaaatataamayatacaacc 180
| ||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 2524 taacaaaatgttaagaagtacctttcccatattcatgttgaaaatataaaatatacaacc 2583
Query: 181 atggcaattaatgaaaataccaggcggctcacatggaaaayatgtatagacttcttgatt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2584 atggcaattaatgaaaataccaggcggctcacatggaaaatatgtatagacttcttgatt 2643
Query: 241 attgatgtctagagactcgtatcacccaaacmactagaaatcaaagtaaaamtcacactt 300
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 2644 attgatgtctagagactcgtatcacccaaacaactagaaatcaaagtaaaaatcacactt 2703
Query: 301 tcctattcgamaacmacagagaaagayaaatcmatacgatgattagtagcccagtttctt 360
|||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2704 tcctattcgaaaacaacagagaaagataaatcaatacgatgattagtagcccagtttctt 2763
Query: 361 taamagtcccttgcmagavcccagataatcacttatccmagttcttactgatctttttag 420
||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2764 taaaagtcccttgcaagaacccagataatcacttatccaagttcttactgatctttttag 2823
Query: 421 aagavaaataatamacgatacaactgttaatmacgagttatcatattgtsagtvtgttgt 480
|||| |||||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 2824 aagaaaaataataaacgatacaactgttaataacgagttatcatattgtaagtatgttgt 2883
Query: 481 gtgcgatgaactttcagatacttttcgtttttyttattttmmcacgttcaatttttcttt 540
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 2884 gtgcgatgaactttcagatacttttcgttttttttattttaaaacgttcaatttttcttt 2943
Query: 541 ttatacatmagtccttcacaagasatagggccttagtaactgtcaatggtttatytactg 600
|||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 2944 ttatacataagtccttcacaagaaatagggccttagtaactgtaaatggtttatttactg 3003
Query: 601 ccatycactgggtattgctcgtaatattagagcacctattataactatcgcaaatcagga 660
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 caattaactgggtattgctcgtaatattagagcacctattataactatcgcaaatcagga 3063
Query: 661 atctcttgtactgttttattgttatgctatcttgctatatccgtgaacaatagtaacccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 atctcttgtactgttttattgttatgctatcttgctatatccgtgaacaatagtaacccg 3123
Query: 721 cgtatcgttacacgaataaattaagtccgggtaatagtacaactgttgataatcctcgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 cgtatcgttacacgaataaattaagtccgggtaatagtacaactgttgataatcctcgcc 3183
Query: 781 ataa 784
||||
Sbjct: 3184 ataa 3187
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4188
Number of Sequences: 1807
Number of extensions: 4188
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)